Tutorials: getting started with the pyAFQ Python library#

These tutorials provide a walk-through of basic pyAFQ usage and some more advanced use-cases. Each one of these pages contains code that users can run from top to bottom. The code will download the data necessary to run the tutorial, and will save results as it goes along.

Getting started with pyAFQ - GroupAFQ

Getting started with pyAFQ - GroupAFQ

Getting started with pyAFQ - ParticipantAFQ

Getting started with pyAFQ - ParticipantAFQ

Re-running pyAFQ

Re-running pyAFQ

Exporting pyAFQ Results

Exporting pyAFQ Results

Visualizing AFQ derivatives

Visualizing AFQ derivatives

How pyAFQ uses BIDS

How pyAFQ uses BIDS

Plotting Default Regions of Interest (ROIs) to Understand the Tracts

Plotting Default Regions of Interest (ROIs) to Understand the Tracts

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