How To#
This section of the documentation provides guides on various aspects of the software.
- How to install
pyAFQ
- How to get help using pyAFQ
- How to cite our work
- Organizing your data
- Re-running pyAFQ
- How to add custom tissue properties from another pipeline
- Tractography from other pipelines
- Matlab AFQ to Python AFQ conversion
- The pyAFQ docker image
- The pyAFQ singularity image
- The pyAFQ Image API
- Tractography Parameters
- Segmentation Parameters
- Cleaning Parameters
- How to examples