How to use pyAFQ

• Organizing your data
  • Example data
  • Preprocessing
• The pyAFQ API optional arguments
  • DATA
  • MAPPING
  • SEGMENTATION
  • TRACTOGRAPHY
  • VIZ
• How to add custom tissue properties from another pipeline
• Tractography from other pipelines
• Matlab AFQ to Python AFQ conversion
• The pyAFQ docker image
• The pyAFQ API methods
• The pyAFQ Image API