Source code for AFQ.data.utils


[docs]
BUNDLE_RECO_2_AFQ = {
    "AF_L": "Left Arcuate",
    "AF_R": "Right Arcuate",
    "UF_L": "Left Uncinate",
    "UF_R": "Right Uncinate",
    "IFOF_L": "Left Inferior Fronto-occipital",
    "IFOF_R": "Right Inferior Fronto-occipital",
    "CST_L": "Left Corticospinal",
    "CST_R": "Right Corticospinal",
    "ILF_L": "Left Inferior Longitudinal",
    "ILF_R": "Right Inferior Longitudinal",
    "SLF_L": "Left Superior Longitudinal",
    "SLF_R": "Right Superior Longitudinal",
}






[docs]
BUNDLE_MAT_2_PYTHON = {
    "RightCorticospinal": "Right Corticospinal",
    "LeftCorticospinal": "Left Corticospinal",
    "RightUncinate": "Right Uncinate",
    "LeftUncinate": "Left Uncinate",
    "Left IFOF": "Left Inferior Fronto-occipital",
    "Right IFOF": "Right Inferior Fronto-occipital",
    "LeftIFOF": "Left Inferior Fronto-occipital",
    "RightIFOF": "Right Inferior Fronto-occipital",
    "RightArcuate": "Right Arcuate",
    "LeftArcuate": "Left Arcuate",
    "Right Thalamic Radiation": "Right Anterior Thalamic",
    "Left Thalamic Radiation": "Left Anterior Thalamic",
    "RightThalamicRadiation": "Right Anterior Thalamic",
    "LeftThalamicRadiation": "Left Anterior Thalamic",
    "Right Cingulum Cingulate": "Right Cingulum Cingulate",
    "Left Cingulum Cingulate": "Left Cingulum Cingulate",
    "RightCingulumCingulate": "Right Cingulum Cingulate",
    "LeftCingulumCingulate": "Left Cingulum Cingulate",
    "Callosum Forceps Major": "Forceps Major",
    "Callosum Forceps Minor": "Forceps Minor",
    "CallosumForcepsMajor": "Forceps Major",
    "CallosumForcepsMinor": "Forceps Minor",
    "Right ILF": "Right Inferior Longitudinal",
    "Left ILF": "Left Inferior Longitudinal",
    "RightILF": "Right Inferior Longitudinal",
    "LeftILF": "Left Inferior Longitudinal",
    "Right SLF": "Right Superior Longitudinal",
    "Left SLF": "Left Superior Longitudinal",
    "RightSLF": "Right Superior Longitudinal",
    "LeftSLF": "Left Superior Longitudinal",
}






[docs]
def aws_import_msg_error(module):
    """Alerts user to install the appropriate aws module"""
    msg = f"To use {module} in pyAFQ, you will "
    msg += f"need to have {module} installed. "
    msg += "You can do that by installing pyAFQ with "
    msg += "`pip install pyAFQ[aws]`"
    raise ImportError(msg)